Genome Meta Information: Haemophilus influenzae NML-Hia-1 (GCA_001856725.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001856725.1 | ||
| HOMD Taxon-ID | HMT-0641 | ||
| Species Name (in use by HOMD) | Haemophilus influenzae | ||
| Organism Name (as deposited) | HMT-641 Haemophilus influenzae NML-Hia-1 | ||
| Strain or Isolate | NML-Hia-1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus influenzae |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 436 | ||
| Contigs |
|
||
| Total Sequence Length | 1,829,217 (bp) | ||
| GC Percentage | 38.02 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/856/725/GCA_001856725.1_ASM185672v1 | ||
| CDS | 1715 | ||
| Genes | 1827 | ||
| mRNA | 1827 | ||
| misc RNA | 33 | ||
| rRNA | 19 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.45 % | ||
| CheckM Completeness | 98.89 % | ||
| CheckM Contamination | 1.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM185672v1 |
| GenBank Assembly Accession | GCA_001856725.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001856725.1 [NCBI] |
| BioSample | SAMN05714732 [NCBI] |
| BioProject | PRJNA328024 [NCBI] |
| Submitter | Public Health Agency of Canada |
| Submission Date | 2016-08-29T17:29:08.337 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 727 |
| Isolation Source | blood |
| Geo Location | Canada: Manitoba |
