Genome Meta Information: Enterococcus italicus DSM 15952 (GCA_001885995.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001885995.1 | ||
| HOMD Taxon-ID | HMT-0803 | ||
| Species Name (in use by HOMD) | Enterococcus italicus | ||
| Organism Name (as deposited) | HMT-803 Enterococcus italicus DSM 15952 | ||
| Strain or Isolate | DSM 15952 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_G; s__Enterococcus_G italicus |
||
| Sequencing Technology | Illumina MiSeq; Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,322,207 (bp) | ||
| GC Percentage | 39.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/885/995/GCA_001885995.1_ASM188599v1 | ||
| CDS | 2238 | ||
| Genes | 2318 | ||
| mRNA | 2318 | ||
| misc RNA | 42 | ||
| rRNA | 2 | ||
| tRNA | 35 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 96.88 % | ||
| CheckM Contamination | 2.14 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM188599v1 |
| GenBank Assembly Accession | GCA_001885995.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001885995.1 [NCBI] |
| BioSample | SAMN03267176 [NCBI] |
| BioProject | PRJNA270385 [NCBI] |
| Submitter | Inner Mongolia Agricultural University |
| Submission Date | 2014-12-16T21:26:48.163 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JXKT01 |
| NCBI TaxID | 888064 |
| Isolation Source | dairy products |
| Geo Location | Italy |
