Genome Meta Information: Enterococcus saccharolyticus DSM 20726 (GCA_001886235.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001886235.1 | ||
| HOMD Taxon-ID | HMT-0802 | ||
| Species Name (in use by HOMD) | Enterococcus saccharolyticus | ||
| Organism Name (as deposited) | HMT-802 Enterococcus saccharolyticus DSM 20726 | ||
| Strain or Isolate | DSM 20726 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_F; s__Enterococcus_F saccharolyticus |
||
| Sequencing Technology | Illumina MiSeq; Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,557,288 (bp) | ||
| GC Percentage | 36.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/886/235/GCA_001886235.1_ASM188623v1 | ||
| CDS | 2553 | ||
| Genes | 2645 | ||
| mRNA | 2645 | ||
| misc RNA | 57 | ||
| rRNA | 2 | ||
| tRNA | 32 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 96.64 % | ||
| CheckM Contamination | 3.7 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM188623v1 |
| GenBank Assembly Accession | GCA_001886235.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001886235.1 [NCBI] |
| BioSample | SAMN03267186 [NCBI] |
| BioProject | PRJNA270385 [NCBI] |
| Submitter | Inner Mongolia Agricultural University |
| Submission Date | 2014-12-16T21:26:49.270 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JXLD01 |
| NCBI TaxID | 41997 |
| Isolation Source | straw bedding |
| Geo Location | missing |
