Genome Meta Information: Streptococcus mitis 321A (GCA_002005545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002005545.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis 321A | ||
| Strain or Isolate | 321A | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_I |
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| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 154.0x | ||
| Contigs |
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| Total Sequence Length | 2,110,680 (bp) | ||
| GC Percentage | 40.44 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/005/545/GCA_002005545.1_ASM200554v1 | ||
| CDS | 1942 | ||
| Genes | 2077 | ||
| mRNA | 2077 | ||
| misc RNA | 50 | ||
| rRNA | 15 | ||
| tRNA | 69 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.88 % | ||
| CheckM Completeness | 99.87 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM200554v1 |
| GenBank Assembly Accession | GCA_002005545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002005545.1 [NCBI] |
| BioSample | SAMN03219950 [NCBI] |
| BioProject | PRJNA268403 [NCBI] |
| Submitter | Xinqiao Hospital of Third military medical university |
| Submission Date | 2014-11-25T01:55:49.910 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LBMT01 |
| NCBI TaxID | 28037 |
| Isolation Source | pharyngeal swabs |
| Geo Location | China |
