Genome Meta Information: Streptococcus mitis CCUG 31611 (GCA_002014755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002014755.1 | ||
| HOMD Taxon-ID | HMT-0677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis CCUG 31611 | ||
| Strain or Isolate | CCUG 31611 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 226 | ||
| Contigs |
|
||
| Total Sequence Length | 1,847,883 (bp) | ||
| GC Percentage | 40.38 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/755/GCA_002014755.1_ASM201475v1 | ||
| CDS | 1719 | ||
| Genes | 1817 | ||
| mRNA | 1817 | ||
| misc RNA | 48 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.84 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM201475v1 |
| GenBank Assembly Accession | GCA_002014755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002014755.1 [NCBI] |
| BioSample | SAMN06286552 [NCBI] |
| BioProject | PRJNA302716 [NCBI] |
| Submitter | TAILORED-Treatment project |
| Submission Date | 2017-02-01T05:00:02.990 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | MUYN01 |
| NCBI TaxID | 28037 |
| Isolation Source | Oral cavity |
| Geo Location | Sweden |
