Genome Meta Information: Moraxella lincolnii CCUG 9405 (GCA_002014765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002014765.1 | ||
| HOMD Taxon-ID | HMT-0154 | ||
| Species Name (in use by HOMD) | Moraxella lincolnii | ||
| Organism Name (as deposited) | HMT-154 Moraxella lincolnii CCUG 9405 | ||
| Strain or Isolate | CCUG 9405 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella_C; s__Moraxella_C lincolnii |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 224 | ||
| Contigs |
|
||
| Total Sequence Length | 2,076,923 (bp) | ||
| GC Percentage | 42.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/014/765/GCA_002014765.1_ASM201476v1 | ||
| CDS | 1781 | ||
| Genes | 1836 | ||
| mRNA | 1836 | ||
| misc RNA | 8 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 93.46 % | ||
| CheckM Contamination | 0.55 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM201476v1 |
| GenBank Assembly Accession | GCA_002014765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002014765.1 [NCBI] |
| BioSample | SAMN06291427 [NCBI] |
| BioProject | PRJNA302716 [NCBI] |
| Submitter | TAILORED-Treatment project |
| Submission Date | 2017-02-02T16:32:04.483 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | MUYT01 |
| NCBI TaxID | 90241 |
| Isolation Source | Human nasopharynx |
| Geo Location | Sweden: Vastra Gotaland, Gothe |
