Genome Meta Information: Bartonella schoenbuchensis R1 (GCA_002022685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002022685.1 | ||
| HOMD Taxon-ID | HMT-0001 | ||
| Species Name (in use by HOMD) | Bartonella schoenbuchensis | ||
| Organism Name (as deposited) | HMT-001 Bartonella schoenbuchensis R1 | ||
| Strain or Isolate | R1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Bartonella; s__Bartonella schoenbuchensis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 45 | ||
| Contigs |
|
||
| Total Sequence Length | 1,728,487 (bp) | ||
| GC Percentage | 37.85 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/022/685/GCA_002022685.1_ASM202268v1 | ||
| CDS | 1639 | ||
| Genes | 1698 | ||
| mRNA | 1698 | ||
| misc RNA | 10 | ||
| rRNA | 6 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.99 % | ||
| CheckM Completeness | 86.56 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM202268v1 |
| GenBank Assembly Accession | GCA_002022685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002022685.1 [NCBI] |
| BioSample | SAMN06213864 [NCBI] |
| BioProject | PRJNA360985 [NCBI] |
| Submitter | University of Basel |
| Submission Date | 2017-01-09T16:48:05.990 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 687861 |
| Isolation Source | blood sample |
| Geo Location | Germany: Schoenbuch |
