Genome Meta Information: Staphylococcus warneri MMP1 (GCA_002026425.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002026425.1 | ||
| HOMD Taxon-ID | HMT-0076 | ||
| Species Name (in use by HOMD) | Staphylococcus warneri | ||
| Organism Name (as deposited) | HMT-076 Staphylococcus warneri MMP1 | ||
| Strain or Isolate | MMP1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus warneri |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 60 | ||
| Contigs |
|
||
| Total Sequence Length | 2,441,279 (bp) | ||
| GC Percentage | 32.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/026/425/GCA_002026425.1_ASM202642v1 | ||
| CDS | 2355 | ||
| Genes | 2469 | ||
| mRNA | 2469 | ||
| misc RNA | 49 | ||
| rRNA | 4 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.58 % | ||
| CheckM Completeness | 99.06 % | ||
| CheckM Contamination | 0.06 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM202642v1 |
| GenBank Assembly Accession | GCA_002026425.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002026425.1 [NCBI] |
| BioSample | SAMN04296377 [NCBI] |
| BioProject | PRJNA304162 [NCBI] |
| Submitter | Karolinska Institutet |
| Submission Date | 2015-11-25T12:48:05.073 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | LNVI01 |
| NCBI TaxID | 1292 |
| Isolation Source | Ancient permafrost from Mammoth Mountain |
| Geo Location | Russia: Mammoth Mountain in th |
