Genome Meta Information: Streptococcus salivarius FDAARGOS_259 (GCA_002073835.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002073835.2 | ||
| HOMD Taxon-ID | HMT-0755 | ||
| Species Name (in use by HOMD) | Streptococcus salivarius | ||
| Organism Name (as deposited) | HMT-755 Streptococcus salivarius FDAARGOS_259 | ||
| Strain or Isolate | FDAARGOS_259 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sp001556435 |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 1960.51 | ||
| Contigs |
|
||
| Total Sequence Length | 2,259,318 (bp) | ||
| GC Percentage | 40.14 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/073/835/GCA_002073835.2_ASM207383v2 | ||
| CDS | 2051 | ||
| Genes | 2179 | ||
| mRNA | 2179 | ||
| misc RNA | 41 | ||
| rRNA | 18 | ||
| tRNA | 68 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.23 % | ||
| CheckM Completeness | 96.01 % | ||
| CheckM Contamination | 2.8 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM207383v2 |
| GenBank Assembly Accession | GCA_002073835.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002073835.2 [NCBI] |
| BioSample | SAMN04875585 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2016-04-20T14:41:12.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1304 |
| Isolation Source | blood |
| Geo Location | USA:DC |
