Genome Meta Information: Streptococcus anginosus ATCC 33397 (GCA_002088025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002088025.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus ATCC 33397 | ||
| Strain or Isolate | ATCC 33397 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus anginosus |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 468 | ||
| Contigs |
|
||
| Total Sequence Length | 1,904,351 (bp) | ||
| GC Percentage | 38.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/088/025/GCA_002088025.1_ASM208802v1 | ||
| CDS | 1822 | ||
| Genes | 1932 | ||
| mRNA | 1932 | ||
| misc RNA | 56 | ||
| rRNA | 5 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.27 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM208802v1 |
| GenBank Assembly Accession | GCA_002088025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002088025.1 [NCBI] |
| BioSample | SAMN06624126 [NCBI] |
| BioProject | PRJNA379934 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-03-21T12:25:09.903 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NARD01 |
| NCBI TaxID | 1000570 |
| Isolation Source | |
| Geo Location | not applicable |
