Genome Meta Information: Haematobacter missouriensis H2381 (GCA_002196905.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002196905.1 | ||
| HOMD Taxon-ID | HMT-0316 | ||
| Species Name (in use by HOMD) | Haematobacter missouriensis | ||
| Organism Name (as deposited) | HMT-316 Haematobacter missouriensis H2381 | ||
| Strain or Isolate | H2381 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Haematobacter; s__Haematobacter missouriensis |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 30 | ||
| Contigs |
|
||
| Total Sequence Length | 4,323,477 (bp) | ||
| GC Percentage | 64.19 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/196/905/GCA_002196905.1_ASM219690v1 | ||
| CDS | 4208 | ||
| Genes | 4291 | ||
| mRNA | 4291 | ||
| misc RNA | 27 | ||
| rRNA | 3 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.76 % | ||
| CheckM Completeness | 99.41 % | ||
| CheckM Contamination | 0.73 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM219690v1 |
| GenBank Assembly Accession | GCA_002196905.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002196905.1 [NCBI] |
| BioSample | SAMN04279643 [NCBI] |
| BioProject | PRJNA302795 [NCBI] |
| Submitter | CDC |
| Submission Date | 2015-11-19T15:54:18.918 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NIPX01 |
| NCBI TaxID | 366616 |
| Isolation Source | |
| Geo Location | USA: Michigan |
