Genome Meta Information: Streptococcus agalactiae CUGBS591 (GCA_002197205.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002197205.1 | ||
| HOMD Taxon-ID | HMT-0537 | ||
| Species Name (in use by HOMD) | Streptococcus agalactiae | ||
| Organism Name (as deposited) | HMT-537 Streptococcus agalactiae CUGBS591 | ||
| Strain or Isolate | CUGBS591 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus agalactiae |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 150 | ||
| Contigs |
|
||
| Total Sequence Length | 2,227,680 (bp) | ||
| GC Percentage | 35.75 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/197/205/GCA_002197205.1_ASM219720v1 | ||
| CDS | 2192 | ||
| Genes | 2337 | ||
| mRNA | 2337 | ||
| misc RNA | 42 | ||
| rRNA | 22 | ||
| tRNA | 80 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.14 % | ||
| CheckM Completeness | 98.6 % | ||
| CheckM Contamination | 0.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM219720v1 |
| GenBank Assembly Accession | GCA_002197205.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002197205.1 [NCBI] |
| BioSample | SAMN05384056 [NCBI] |
| BioProject | PRJNA293392 [NCBI] |
| Submitter | Singapore Streptococcus agalactiae working group |
| Submission Date | 2016-07-13T07:25:13.760 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1311 |
| Isolation Source | Joint Aspirate |
| Geo Location | Hong Kong |
