Genome Meta Information: Eikenella corrodens KCOM 1378 (GCA_002204395.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002204395.1 | ||
| HOMD Taxon-ID | HMT-0577 | ||
| Species Name (in use by HOMD) | Eikenella corrodens | ||
| Organism Name (as deposited) | HMT-577 Eikenella corrodens KCOM 1378 | ||
| Strain or Isolate | KCOM 1378 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Eikenella; s__Eikenella corrodens |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 1416 | ||
| Contigs |
|
||
| Total Sequence Length | 2,227,855 (bp) | ||
| GC Percentage | 55.66 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/204/395/GCA_002204395.1_ASM220439v1 | ||
| CDS | 2118 | ||
| Genes | 2199 | ||
| mRNA | 2199 | ||
| misc RNA | 11 | ||
| rRNA | 12 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.07 % | ||
| CheckM Completeness | 95.74 % | ||
| CheckM Contamination | 0.56 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM220439v1 |
| GenBank Assembly Accession | GCA_002204395.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002204395.1 [NCBI] |
| BioSample | SAMN06947081 [NCBI] |
| BioProject | PRJNA386423 [NCBI] |
| Submitter | Chosun University |
| Submission Date | 2017-05-12T02:19:06.316 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | NHRS01 |
| NCBI TaxID | 539 |
| Isolation Source | pus |
| Geo Location | South Korea |
