Genome Meta Information: Fusobacterium nucleatum_sensu_stricto W7671 (GCA_002243405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002243405.1 | ||
| HOMD Taxon-ID | HMT-0698 | ||
| Species Name (in use by HOMD) | Fusobacterium nucleatum_sensu_stricto | ||
| Organism Name (as deposited) | HMT-698 Fusobacterium nucleatum_sensu_stricto W7671 | ||
| Strain or Isolate | W7671 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium nucleatum_K |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 96 | ||
| Contigs |
|
||
| Total Sequence Length | 2,126,947 (bp) | ||
| GC Percentage | 27.77 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/243/405/GCA_002243405.1_ASM224340v1 | ||
| CDS | 1973 | ||
| Genes | 2080 | ||
| mRNA | 2080 | ||
| misc RNA | 19 | ||
| rRNA | 24 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.26 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM224340v1 |
| GenBank Assembly Accession | GCA_002243405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002243405.1 [NCBI] |
| BioSample | SAMN03897723 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2015-07-23T20:18:23.000 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 671211 |
| Isolation Source | Subgingival plaque |
| Geo Location | United Kingdom: London |
