Genome Meta Information: Streptococcus sobrinus KCOM 1157 (GCA_002266475.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002266475.1 | ||
| HOMD Taxon-ID | HMT-0768 | ||
| Species Name (in use by HOMD) | Streptococcus sobrinus | ||
| Organism Name (as deposited) | HMT-768 Streptococcus sobrinus KCOM 1157 | ||
| Strain or Isolate | KCOM 1157 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sobrinus |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 1156 | ||
| Contigs |
|
||
| Total Sequence Length | 2,198,106 (bp) | ||
| GC Percentage | 43.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/266/475/GCA_002266475.1_ASM226647v1 | ||
| CDS | 2056 | ||
| Genes | 2163 | ||
| mRNA | 2163 | ||
| misc RNA | 39 | ||
| rRNA | 10 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.9 % | ||
| CheckM Completeness | 99.13 % | ||
| CheckM Contamination | 0.51 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM226647v1 |
| GenBank Assembly Accession | GCA_002266475.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002266475.1 [NCBI] |
| BioSample | SAMN03263586 [NCBI] |
| BioProject | PRJNA270153 [NCBI] |
| Submitter | Chosun University |
| Submission Date | 2014-12-12T01:58:18.476 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NPOU01 |
| NCBI TaxID | 1310 |
| Isolation Source | |
| Geo Location | South Korea: Gwangju |
