Genome Meta Information: Enterococcus durans BDGP3 (GCA_002277935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002277935.1 | ||
| HOMD Taxon-ID | HMT-0880 | ||
| Species Name (in use by HOMD) | Enterococcus durans | ||
| Organism Name (as deposited) | HMT-880 Enterococcus durans BDGP3 | ||
| Strain or Isolate | BDGP3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B; s__Enterococcus_B durans |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 150 | ||
| Contigs |
|
||
| Total Sequence Length | 2,988,928 (bp) | ||
| GC Percentage | 38.04 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/277/935/GCA_002277935.1_ASM227793v1 | ||
| CDS | 2723 | ||
| Genes | 2873 | ||
| mRNA | 2873 | ||
| misc RNA | 62 | ||
| rRNA | 18 | ||
| tRNA | 69 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.41 % | ||
| CheckM Completeness | 98.07 % | ||
| CheckM Contamination | 0.17 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM227793v1 |
| GenBank Assembly Accession | GCA_002277935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002277935.1 [NCBI] |
| BioSample | SAMN07510606 [NCBI] |
| BioProject | PRJNA397225 [NCBI] |
| Submitter | Lawrence Berkeley National Laboratory |
| Submission Date | 2017-08-15T21:15:03.243 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 53345 |
| Isolation Source | |
| Geo Location | USA:94710 |
