Genome Meta Information: Corynebacterium gottingense NML99-0020 (GCA_002285125.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002285125.1 | ||
| HOMD Taxon-ID | HMT-0207 | ||
| Species Name (in use by HOMD) | Corynebacterium gottingense | ||
| Organism Name (as deposited) | HMT-207 Corynebacterium gottingense NML99-0020 | ||
| Strain or Isolate | NML99-0020 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium gottingense |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 132 | ||
| Contigs |
|
||
| Total Sequence Length | 2,483,065 (bp) | ||
| GC Percentage | 65.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/285/125/GCA_002285125.1_ASM228512v1 | ||
| CDS | 2254 | ||
| Genes | 2328 | ||
| mRNA | 2328 | ||
| misc RNA | 10 | ||
| rRNA | 7 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.13 % | ||
| CheckM Completeness | 99.85 % | ||
| CheckM Contamination | 0.46 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM228512v1 |
| GenBank Assembly Accession | GCA_002285125.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002285125.1 [NCBI] |
| BioSample | SAMN07539809 [NCBI] |
| BioProject | PRJNA399534 [NCBI] |
| Submitter | National Microbiology Laboratory/ Public Health Agency of Canada |
| Submission Date | 2017-08-22T17:45:05.786 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NSGN01 |
| NCBI TaxID | 2026255 |
| Isolation Source | unknown |
| Geo Location | Canada: Ontario |
