Genome Meta Information: Corynebacterium simulans AH4003 (GCA_002351405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002351405.1 | ||
| HOMD Taxon-ID | HMT-0062 | ||
| Species Name (in use by HOMD) | Corynebacterium simulans | ||
| Organism Name (as deposited) | HMT-062 Corynebacterium simulans AH4003 | ||
| Strain or Isolate | AH4003 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium simulans |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 854 | ||
| Contigs |
|
||
| Total Sequence Length | 2,637,705 (bp) | ||
| GC Percentage | 59.23 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/351/405/GCA_002351405.1_ASM235140v1 | ||
| CDS | 2446 | ||
| Genes | 2513 | ||
| mRNA | 2513 | ||
| misc RNA | 7 | ||
| rRNA | 5 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 84.41 % | ||
| CheckM Completeness | 86.98 % | ||
| CheckM Contamination | 8.48 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM235140v1 |
| GenBank Assembly Accession | GCA_002351405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002351405.1 [NCBI] |
| BioSample | SAMN07660488 [NCBI] |
| BioProject | PRJNA407641 [NCBI] |
| Submitter | San Diego State University |
| Submission Date | 2017-09-16T19:06:02.310 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | NWBP01 |
| NCBI TaxID | 38284 |
| Isolation Source | not applicable |
| Geo Location | not applicable |
