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Genome Meta Information:
Rothia mucilaginosa FDAARGOS_369 (GCA_002386365.1)
| HOMD Genome-ID | GCA_002386365.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 FDAARGOS_369 |
| Strain or Isolate | FDAARGOS_369 |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia sp001808955 |
| Sequencing Technology | PacBio; Illumina |
| Genome Coverage | 12.6x |
| Contigs |
|
| Total Sequence Length | 2,408,770 (bp) |
| GC Percentage | 59.5 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/386/365/GCA_002386365.1_ASM238636v1 |
| CDS | 1876 |
| Genes | 1950 |
| mRNA | 1950 |
| misc RNA | 13 |
| rRNA | 10 |
| tRNA | 50 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) | No Available Data |
|
| Genome Assembly Name | ASM238636v1 |
| GenBank Assembly Accession |
GCA_002386365.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_002386365.1
[NCBI]
|
| BioSample |
SAMN07312413
[NCBI]
|
| BioProject |
PRJNA231221
[NCBI]
|
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2017-07-03T15:03:04.486 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | live |
| WGS Project | |
| NCBI TaxID | 43675 |
| Isolation Source | blood |
| Geo Location | USA:DC |
| ANI (Average Nucluotide Identity) | 94.27 % |
| CheckM Completeness | 99.35 % |
| CheckM Percentile | 95.833336 % |
| CheckM Contamination | 1.3 % |
|
