Genome Meta Information: Staphylococcus pasteuri JS7 (GCA_002442915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002442915.1 | ||
| HOMD Taxon-ID | HMT-0141 | ||
| Species Name (in use by HOMD) | Staphylococcus pasteuri | ||
| Organism Name (as deposited) | HMT-141 Staphylococcus pasteuri JS7 | ||
| Strain or Isolate | JS7 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus pasteuri |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 280 | ||
| Contigs |
|
||
| Total Sequence Length | 2,622,223 (bp) | ||
| GC Percentage | 31.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/442/915/GCA_002442915.1_ASM244291v1 | ||
| CDS | 2515 | ||
| Genes | 2658 | ||
| mRNA | 2658 | ||
| misc RNA | 62 | ||
| rRNA | 19 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.98 % | ||
| CheckM Completeness | 98.69 % | ||
| CheckM Contamination | 0.29 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM244291v1 |
| GenBank Assembly Accession | GCA_002442915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002442915.1 [NCBI] |
| BioSample | SAMN05831569 [NCBI] |
| BioProject | PRJNA344823 [NCBI] |
| Submitter | Korea Food Research Institute |
| Submission Date | 2016-09-27T22:38:02.973 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 45972 |
| Isolation Source | Korean fermented food |
| Geo Location | South Korea |
