Genome Meta Information: Dermabacter hominis 32T (GCA_002443115.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002443115.1 | ||
| HOMD Taxon-ID | HMT-0354 | ||
| Species Name (in use by HOMD) | Dermabacter hominis | ||
| Organism Name (as deposited) | HMT-354 Dermabacter hominis 32T | ||
| Strain or Isolate | 32T | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Dermabacteraceae;g__Dermabacter; s__Dermabacter hominis |
||
| Sequencing Technology | PacBio; IonTorrent | ||
| Genome Coverage | 300 | ||
| Contigs |
|
||
| Total Sequence Length | 2,398,786 (bp) | ||
| GC Percentage | 62.9 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/443/115/GCA_002443115.1_ASM244311v1 | ||
| CDS | 2178 | ||
| Genes | 2244 | ||
| mRNA | 2244 | ||
| misc RNA | 6 | ||
| rRNA | 10 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 94.65 % | ||
| CheckM Contamination | 5.73 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM244311v1 |
| GenBank Assembly Accession | GCA_002443115.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002443115.1 [NCBI] |
| BioSample | SAMN07665299 [NCBI] |
| BioProject | PRJNA407870 [NCBI] |
| Submitter | Korea Centers for Disease Control and Prevention |
| Submission Date | 2017-09-19T04:54:04.500 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1667168 |
| Isolation Source | Closed pus |
| Geo Location | South Korea: Jinju |
