Genome Meta Information: Fusobacterium pseudoperiodonticum KCOM 1321 (GCA_002761935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002761935.1 | ||
| HOMD Taxon-ID | HMT-0429 | ||
| Species Name (in use by HOMD) | Fusobacterium pseudoperiodonticum | ||
| Organism Name (as deposited) | HMT-429 Fusobacterium pseudoperiodonticum KCOM 1321 | ||
| Strain or Isolate | KCOM 1321 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium pseudoperiodonticum |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 436.7 | ||
| Contigs |
|
||
| Total Sequence Length | 2,298,437 (bp) | ||
| GC Percentage | 28.25 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/761/935/GCA_002761935.1_ASM276193v1 | ||
| CDS | 2147 | ||
| Genes | 2229 | ||
| mRNA | 2229 | ||
| misc RNA | 21 | ||
| rRNA | 15 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.01 % | ||
| CheckM Completeness | 98.08 % | ||
| CheckM Contamination | 0.99 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM276193v1 |
| GenBank Assembly Accession | GCA_002761935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002761935.1 [NCBI] |
| BioSample | SAMN07956183 [NCBI] |
| BioProject | PRJNA416418 [NCBI] |
| Submitter | Korean Collection for Oral Microbiology |
| Submission Date | 2017-10-31T02:27:04.810 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PEQX01 |
| NCBI TaxID | 2663009 |
| Isolation Source | Subgingival dental plaque |
| Geo Location | South Korea: Gwangju |
