Genome Meta Information: Fusobacterium animalis P2_CP (GCA_002762005.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002762005.1 | ||
| HOMD Taxon-ID | HMT-0420 | ||
| Species Name (in use by HOMD) | Fusobacterium animalis | ||
| Organism Name (as deposited) | HMT-420 Fusobacterium animalis P2_CP | ||
| Strain or Isolate | P2_CP | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium animalis |
||
| Sequencing Technology | MiSeq | ||
| Genome Coverage | 55 | ||
| Contigs |
|
||
| Total Sequence Length | 2,351,018 (bp) | ||
| GC Percentage | 26.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/762/005/GCA_002762005.1_ASM276200v1 | ||
| CDS | 2228 | ||
| Genes | 2292 | ||
| mRNA | 2292 | ||
| misc RNA | 20 | ||
| rRNA | 3 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.48 % | ||
| CheckM Completeness | 99.52 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM276200v1 |
| GenBank Assembly Accession | GCA_002762005.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002762005.1 [NCBI] |
| BioSample | SAMN07448031 [NCBI] |
| BioProject | PRJNA362951 [NCBI] |
| Submitter | Dana-Farber Cancer Institute |
| Submission Date | 2017-08-03T14:42:03.560 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NPND01 |
| NCBI TaxID | 76859 |
| Isolation Source | Colorectal primary tumor |
| Geo Location | Spain |
