Taxon Table | Genome Table
Genome Meta Information:
Fusobacterium
animalis
P2_LM (GCA_002762015.1)
| HOMD Genome-ID |
GCA_002762015.1
|
| HOMD Taxon-ID |
HMT-0420
|
| Species Name (in use by HOMD) |
Fusobacterium animalis
|
| Organism Name (as deposited) |
HMT-420 Fusobacterium animalis P2_LM
|
| Strain or Isolate |
P2_LM
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;
s__Fusobacterium animalis |
| Sequencing Technology |
MiSeq
|
| Genome Coverage |
55
|
| Contigs |
Number of Contigs: 150
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,346,246 (bp) |
| GC Percentage |
26.9
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/762/015/GCA_002762015.1_ASM276201v1
|
| CDS |
2216
|
| Genes |
2280
|
| mRNA |
2280
|
| misc RNA |
20
|
| rRNA |
3
|
| tRNA |
40
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
96.5 %
|
| CheckM Completeness |
99.52 %
|
| CheckM Contamination |
0.51 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM276201v1
|
| GenBank Assembly Accession |
GCA_002762015.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_002762015.1
[NCBI]
|
| BioSample |
SAMN07448032
[NCBI]
|
| BioProject |
PRJNA362951
[NCBI]
|
| Submitter |
Dana-Farber Cancer Institute
|
| Submission Date |
2017-08-03T14:42:03.580
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
NPNC01
|
| NCBI TaxID |
76859
|
| Isolation Source |
Liver metastasis
|
| Geo Location |
Spain
|
