Genome Meta Information: Fusobacterium pseudoperiodonticum KCOM 1283 (GCA_002763595.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002763595.1 | ||
| HOMD Taxon-ID | HMT-0429 | ||
| Species Name (in use by HOMD) | Fusobacterium pseudoperiodonticum | ||
| Organism Name (as deposited) | HMT-429 Fusobacterium pseudoperiodonticum KCOM 1283 | ||
| Strain or Isolate | KCOM 1283 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium pseudoperiodonticum |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 260.3 | ||
| Contigs |
|
||
| Total Sequence Length | 2,222,370 (bp) | ||
| GC Percentage | 28.2 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/763/595/GCA_002763595.1_ASM276359v1 | ||
| CDS | 2089 | ||
| Genes | 2171 | ||
| mRNA | 2171 | ||
| misc RNA | 21 | ||
| rRNA | 15 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.16 % | ||
| CheckM Completeness | 98 % | ||
| CheckM Contamination | 0.87 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM276359v1 |
| GenBank Assembly Accession | GCA_002763595.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002763595.1 [NCBI] |
| BioSample | SAMN07956182 [NCBI] |
| BioProject | PRJNA416417 [NCBI] |
| Submitter | Korean Collection for Oral Microbiology |
| Submission Date | 2017-10-31T02:21:04.916 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2663009 |
| Isolation Source | Subgingival dental plaque |
| Geo Location | Korea: Gwangju |
