Genome Meta Information: Dermabacter hominis UMB0490 (GCA_002847685.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002847685.2 | ||
| HOMD Taxon-ID | HMT-0354 | ||
| Species Name (in use by HOMD) | Dermabacter hominis | ||
| Organism Name (as deposited) | HMT-354 Dermabacter hominis UMB0490 | ||
| Strain or Isolate | UMB0490 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Dermabacteraceae;g__Dermabacter; s__Dermabacter hominis |
||
| Sequencing Technology | Nanopore; Illumina | ||
| Genome Coverage | 501 | ||
| Contigs |
|
||
| Total Sequence Length | 2,302,060 (bp) | ||
| GC Percentage | 62.84 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/847/685/GCA_002847685.2_ASM284768v2 | ||
| CDS | 2035 | ||
| Genes | 2100 | ||
| mRNA | 2100 | ||
| misc RNA | 7 | ||
| rRNA | 10 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.95 % | ||
| CheckM Completeness | 97.01 % | ||
| CheckM Contamination | 2.64 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM284768v2 |
| GenBank Assembly Accession | GCA_002847685.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002847685.2 [NCBI] |
| BioSample | SAMN08193659 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-12-16T21:05:05.033 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 36740 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
