Genome Meta Information: Staphylococcus hominis K1 (GCA_002850375.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002850375.1 | ||
| HOMD Taxon-ID | HMT-0127 | ||
| Species Name (in use by HOMD) | Staphylococcus hominis | ||
| Organism Name (as deposited) | HMT-127 Staphylococcus hominis K1 | ||
| Strain or Isolate | K1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus hominis |
||
| Sequencing Technology | IonTorrent | ||
| Genome Coverage | 54 | ||
| Contigs |
|
||
| Total Sequence Length | 2,253,412 (bp) | ||
| GC Percentage | 31.36 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/850/375/GCA_002850375.1_ASM285037v1 | ||
| CDS | 2238 | ||
| Genes | 2359 | ||
| mRNA | 2359 | ||
| misc RNA | 55 | ||
| rRNA | 4 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.63 % | ||
| CheckM Completeness | 90.1 % | ||
| CheckM Contamination | 2.51 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM285037v1 |
| GenBank Assembly Accession | GCA_002850375.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002850375.1 [NCBI] |
| BioSample | SAMN06678637 [NCBI] |
| BioProject | PRJNA376656 [NCBI] |
| Submitter | CENTER FOR INTERDISCIPLINARY STUDIES IN SCIENCE AND TECHNOLOGY |
| Submission Date | 2017-04-04T04:47:05.273 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 145391 |
| Isolation Source | bovine milk |
| Geo Location | India:Anand |
