Genome Meta Information: Staphylococcus hominis UMB0272 (GCA_002860985.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002860985.1 | ||
| HOMD Taxon-ID | HMT-0127 | ||
| Species Name (in use by HOMD) | Staphylococcus hominis | ||
| Organism Name (as deposited) | HMT-127 Staphylococcus hominis UMB0272 | ||
| Strain or Isolate | UMB0272 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus hominis |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 378.8 | ||
| Contigs |
|
||
| Total Sequence Length | 2,218,470 (bp) | ||
| GC Percentage | 31.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/860/985/GCA_002860985.1_ASM286098v1 | ||
| CDS | 2133 | ||
| Genes | 2259 | ||
| mRNA | 2259 | ||
| misc RNA | 54 | ||
| rRNA | 8 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.14 % | ||
| CheckM Completeness | 91.68 % | ||
| CheckM Contamination | 5.92 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM286098v1 |
| GenBank Assembly Accession | GCA_002860985.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002860985.1 [NCBI] |
| BioSample | SAMN08193716 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-12-16T21:05:05.952 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PKIP01 |
| NCBI TaxID | 1290 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
