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Genome Meta Information:
Rothia mucilaginosa UMB0024 (GCA_002861015.1)
| HOMD Genome-ID | GCA_002861015.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 UMB0024 |
| Strain or Isolate | UMB0024 |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia mucilaginosa |
| Sequencing Technology | Illumina HiSeq |
| Genome Coverage | 366.0x |
| Contigs |
|
| Total Sequence Length | 2,258,154 (bp) |
| GC Percentage | 59.55 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/861/015/GCA_002861015.1_ASM286101v1 |
| CDS | 1739 |
| Genes | 1808 |
| mRNA | 1808 |
| misc RNA | 13 |
| rRNA | 6 |
| tRNA | 49 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
Open SVG
|
|
| Genome Assembly Name | ASM286101v1 |
| GenBank Assembly Accession |
GCA_002861015.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_002861015.1
[NCBI]
|
| BioSample |
SAMN08193715
[NCBI]
|
| BioProject |
PRJNA316969
[NCBI]
|
| Submitter | Loyola University Chicago |
| Submission Date | 2017-12-16T21:05:05.938 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | live |
| WGS Project | PKIQ01 |
| NCBI TaxID | 43675 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
| ANI (Average Nucluotide Identity) | 95.63 % |
| CheckM Completeness | 99.06 % |
| CheckM Percentile | 73.333336 % |
| CheckM Contamination | 0.81 % |
|
