Genome Meta Information: Gemella sanguinis UMB0186 (GCA_002871615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002871615.1 | ||
| HOMD Taxon-ID | HMT-0757 | ||
| Species Name (in use by HOMD) | Gemella sanguinis | ||
| Organism Name (as deposited) | HMT-757 Gemella sanguinis UMB0186 | ||
| Strain or Isolate | UMB0186 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Gemellaceae;g__Gemella; s__Gemella sanguinis |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 278.84 | ||
| Contigs |
|
||
| Total Sequence Length | 1,877,482 (bp) | ||
| GC Percentage | 29.84 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/871/615/GCA_002871615.1_ASM287161v1 | ||
| CDS | 1758 | ||
| Genes | 1835 | ||
| mRNA | 1835 | ||
| misc RNA | 29 | ||
| rRNA | 6 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.31 % | ||
| CheckM Completeness | 98.99 % | ||
| CheckM Contamination | 1.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM287161v1 |
| GenBank Assembly Accession | GCA_002871615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002871615.1 [NCBI] |
| BioSample | SAMN07511414 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-08-16T12:32:05.333 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PNGT01 |
| NCBI TaxID | 84135 |
| Isolation Source | catheter |
| Geo Location | USA: Maywood, IL |
