Genome Meta Information: Corynebacterium kroppenstedtii UMB0869 (GCA_002871755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002871755.1 | ||
| HOMD Taxon-ID | HMT-0049 | ||
| Species Name (in use by HOMD) | Corynebacterium kroppenstedtii | ||
| Organism Name (as deposited) | HMT-049 Corynebacterium kroppenstedtii UMB0869 | ||
| Strain or Isolate | UMB0869 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium parakroppenstedtii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 119.65 | ||
| Contigs |
|
||
| Total Sequence Length | 2,516,257 (bp) | ||
| GC Percentage | 56.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/871/755/GCA_002871755.1_ASM287175v1 | ||
| CDS | 2151 | ||
| Genes | 2218 | ||
| mRNA | 2218 | ||
| misc RNA | 15 | ||
| rRNA | 3 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.96 % | ||
| CheckM Completeness | 97.7 % | ||
| CheckM Contamination | 0.57 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM287175v1 |
| GenBank Assembly Accession | GCA_002871755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002871755.1 [NCBI] |
| BioSample | SAMN07511398 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-08-16T12:32:05.076 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PNHH01 |
| NCBI TaxID | 2828363 |
| Isolation Source | catheter |
| Geo Location | USA: Maywood, IL |
