Genome Meta Information: Actinomyces graevenitzii UMB0286 (GCA_002871975.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002871975.1 | ||
| HOMD Taxon-ID | HMT-866 | ||
| Species Name (in use by HOMD) | Actinomyces graevenitzii | ||
| Organism Name (as deposited) | HMT-866 Actinomyces graevenitzii UMB0286 | ||
| Strain or Isolate | UMB0286 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces graevenitzii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 135.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,107,861 (bp) | ||
| GC Percentage | 57.82 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/871/975/GCA_002871975.1_ASM287197v1 | ||
| CDS | 1723 | ||
| Genes | 1795 | ||
| mRNA | 1795 | ||
| misc RNA | 10 | ||
| rRNA | 9 | ||
| tRNA | 51 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.53 % | ||
| CheckM Contamination | 0.51 % | ||
| CheckM2 Completeness | 99.21 % | ||
| CheckM2 Contamination | 0.35 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM287197v1 |
| GenBank Assembly Accession | GCA_002871975.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002871975.1 [NCBI] |
| BioSample | SAMN07511382 [NCBI] |
| BioProject | PRJNA316969 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2017-08-16T12:32:04.707 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | PNHV01 |
| NCBI TaxID | 55565 |
| Isolation Source | catheter |
| Geo Location | USA: Maywood, IL |
