Genome Meta Information: Streptococcus agalactiae SA220 (GCA_002881535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002881535.1 | ||
| HOMD Taxon-ID | HMT-0537 | ||
| Species Name (in use by HOMD) | Streptococcus agalactiae | ||
| Organism Name (as deposited) | HMT-537 Streptococcus agalactiae SA220 | ||
| Strain or Isolate | SA220 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus agalactiae |
||
| Sequencing Technology | IonTorrent | ||
| Genome Coverage | 188 | ||
| Contigs |
|
||
| Total Sequence Length | 1,841,963 (bp) | ||
| GC Percentage | 35.48 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/881/535/GCA_002881535.1_ASM288153v1 | ||
| CDS | 1881 | ||
| Genes | 1990 | ||
| mRNA | 1990 | ||
| misc RNA | 27 | ||
| rRNA | 18 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.94 % | ||
| CheckM Completeness | 91.56 % | ||
| CheckM Contamination | 0.17 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM288153v1 |
| GenBank Assembly Accession | GCA_002881535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002881535.1 [NCBI] |
| BioSample | SAMN06294315 [NCBI] |
| BioProject | PRJNA369840 [NCBI] |
| Submitter | Universidade Federal de Minas Gerais |
| Submission Date | 2017-02-03T12:57:06.056 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1311 |
| Isolation Source | brain |
| Geo Location | Brazil |
