Genome Meta Information: Desulfobulbus oralis HOT041/ORNL (GCA_002952055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002952055.1 | ||
| HOMD Taxon-ID | HMT-0041 | ||
| Species Name (in use by HOMD) | Desulfobulbus oralis | ||
| Organism Name (as deposited) | HMT-041 Desulfobulbus oralis HOT041/ORNL | ||
| Strain or Isolate | HOT041/ORNL | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfobulbaceae;g__Desulfobulbus; s__Desulfobulbus oralis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 700 | ||
| Contigs |
|
||
| Total Sequence Length | 2,774,417 (bp) | ||
| GC Percentage | 59.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/952/055/GCA_002952055.1_ASM295205v1 | ||
| CDS | 2436 | ||
| Genes | 2504 | ||
| mRNA | 2504 | ||
| misc RNA | 10 | ||
| rRNA | 6 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 77.28 % | ||
| CheckM Contamination | 2.72 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM295205v1 |
| GenBank Assembly Accession | GCA_002952055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002952055.1 [NCBI] |
| BioSample | SAMN06909033 [NCBI] |
| BioProject | PRJNA385722 [NCBI] |
| Submitter | Oak Ridge National Laboratory |
| Submission Date | 2017-05-07T13:24:03.020 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1986146 |
| Isolation Source | oral subgingival |
| Geo Location | USA: Columbus Ohio |
