Genome Meta Information: Dietzia cinnamea W5195 (GCA_002999155.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002999155.1 | ||
| HOMD Taxon-ID | HMT-0368 | ||
| Species Name (in use by HOMD) | Dietzia cinnamea | ||
| Organism Name (as deposited) | HMT-368 Dietzia cinnamea W5195 | ||
| Strain or Isolate | W5195 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Dietzia; s__Dietzia cinnamea |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 140 | ||
| Contigs |
|
||
| Total Sequence Length | 3,679,573 (bp) | ||
| GC Percentage | 70.77 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/999/155/GCA_002999155.1_ASM299915v1 | ||
| CDS | 3446 | ||
| Genes | 3537 | ||
| mRNA | 3537 | ||
| misc RNA | 22 | ||
| rRNA | 12 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.74 % | ||
| CheckM Contamination | 0.84 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM299915v1 |
| GenBank Assembly Accession | GCA_002999155.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002999155.1 [NCBI] |
| BioSample | SAMN08439030 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2018-01-30T17:19:05.023 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 712270 |
| Isolation Source | Tooth root canal |
| Geo Location | United Kingdom: London |
