Genome Meta Information: Hallella sp. HMT-376 F0043 (GCA_003043945.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003043945.1 | ||
| HOMD Taxon-ID | HMT-0376 | ||
| Species Name (in use by HOMD) | Hallella sp. HMT-376 | ||
| Organism Name (as deposited) | HMT-376 Hallella sp. HMT-376 F0043 | ||
| Strain or Isolate | F0043 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella sp003043945 |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 101 | ||
| Contigs |
|
||
| Total Sequence Length | 3,017,058 (bp) | ||
| GC Percentage | 49.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/043/945/GCA_003043945.1_ASM304394v1 | ||
| CDS | 2699 | ||
| Genes | 2780 | ||
| mRNA | 2780 | ||
| misc RNA | 12 | ||
| rRNA | 13 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM304394v1 |
| GenBank Assembly Accession | GCA_003043945.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003043945.1 [NCBI] |
| BioSample | SAMN08743843 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2018-03-20T14:51:11.670 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PYXG01 |
| NCBI TaxID | 712466 |
| Isolation Source | 3 mesial subgingival |
| Geo Location | USA: Blacksberg, VA |
