Genome Meta Information: Lachnospiraceae [G2] bacterium HMT-096 F0428 (GCA_003043955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003043955.1 | ||
| HOMD Taxon-ID | HMT-0096 | ||
| Species Name (in use by HOMD) | Lachnospiraceae [G2] bacterium HMT-096 | ||
| Organism Name (as deposited) | HMT-096 Lachnospiraceae [G2] bacterium HMT-096 F0428 | ||
| Strain or Isolate | F0428 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__F0428; s__F0428 sp003043955 |
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| Sequencing Technology | PacBio | ||
| Genome Coverage | 46 | ||
| Contigs |
|
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| Total Sequence Length | 2,232,415 (bp) | ||
| GC Percentage | 39.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/043/955/GCA_003043955.1_ASM304395v1 | ||
| CDS | 2093 | ||
| Genes | 2182 | ||
| mRNA | 2182 | ||
| misc RNA | 23 | ||
| rRNA | 14 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM304395v1 |
| GenBank Assembly Accession | GCA_003043955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003043955.1 [NCBI] |
| BioSample | SAMN08743845 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2018-03-20T14:51:11.720 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PYXF01 |
| NCBI TaxID | 712982 |
| Isolation Source | Supragingival dental plaque, molar tooth |
| Geo Location | USA: Boston, MA |
