Genome Meta Information: Capnocytophaga leadbetteri DSM 22902 (GCA_003054025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003054025.1 | ||
| HOMD Taxon-ID | HMT-0329 | ||
| Species Name (in use by HOMD) | Capnocytophaga leadbetteri | ||
| Organism Name (as deposited) | HMT-329 Capnocytophaga leadbetteri DSM 22902 | ||
| Strain or Isolate | DSM 22902 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga; s__Capnocytophaga leadbetteri |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 415 | ||
| Contigs |
|
||
| Total Sequence Length | 2,636,893 (bp) | ||
| GC Percentage | 39.8 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/054/025/GCA_003054025.1_ASM305402v1 | ||
| CDS | 2344 | ||
| Genes | 2398 | ||
| mRNA | 2398 | ||
| misc RNA | 8 | ||
| rRNA | 2 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.45 % | ||
| CheckM Contamination | 0.29 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM305402v1 |
| GenBank Assembly Accession | GCA_003054025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003054025.1 [NCBI] |
| BioSample | SAMN08779108 [NCBI] |
| BioProject | PRJNA443918 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2018-03-22T21:08:47.403 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QBKG01 |
| NCBI TaxID | 327575 |
| Isolation Source | missing |
| Geo Location | missing |
