Genome Meta Information: Aggregatibacter kilianii PN_649 (GCA_003130015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003130015.1 | ||
| HOMD Taxon-ID | HMT-426 | ||
| Species Name (in use by HOMD) | Aggregatibacter kilianii | ||
| Organism Name (as deposited) | HMT-426 Aggregatibacter kilianii PN_649 | ||
| Strain or Isolate | PN_649 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter kilianii |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 193.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,379,268 (bp) | ||
| GC Percentage | 42.61 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/130/015/GCA_003130015.1_ASM313001v1 | ||
| CDS | 2159 | ||
| Genes | 2278 | ||
| mRNA | 2278 | ||
| misc RNA | 63 | ||
| rRNA | 4 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97 % | ||
| CheckM Completeness | 99.89 % | ||
| CheckM Contamination | 0.25 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM313001v1 |
| GenBank Assembly Accession | GCA_003130015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003130015.1 [NCBI] |
| BioSample | SAMN07488459 [NCBI] |
| BioProject | PRJNA397823 [NCBI] |
| Submitter | Aarhus University |
| Submission Date | 2017-08-10T04:04:08.046 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NRCL01 |
| NCBI TaxID | 2025884 |
| Isolation Source | blood |
| Geo Location | Denmark |
