Genome Meta Information: Lachnoanaerobaculum umeaense DSM 23576 (GCA_003254255.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003254255.1 | ||
| HOMD Taxon-ID | HMT-0107 | ||
| Species Name (in use by HOMD) | Lachnoanaerobaculum umeaense | ||
| Organism Name (as deposited) | HMT-107 Lachnoanaerobaculum umeaense DSM 23576 | ||
| Strain or Isolate | DSM 23576 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Lachnoanaerobaculum; s__Lachnoanaerobaculum umeaense |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 460 | ||
| Contigs |
|
||
| Total Sequence Length | 2,705,257 (bp) | ||
| GC Percentage | 34.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/254/255/GCA_003254255.1_ASM325425v1 | ||
| CDS | 2496 | ||
| Genes | 2554 | ||
| mRNA | 0 | ||
| misc RNA | 12 | ||
| rRNA | 2 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.38 % | ||
| CheckM Contamination | 0.31 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM325425v1 |
| GenBank Assembly Accession | GCA_003254255.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003254255.1 [NCBI] |
| BioSample | SAMN08770186 [NCBI] |
| BioProject | PRJNA439980 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2018-03-21T23:40:32.336 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QKZH01 |
| NCBI TaxID | 617123 |
| Isolation Source | missing |
| Geo Location | missing |
