Genome Meta Information: Faecalibacterium prausnitzii APC918/95b (GCA_003312465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003312465.1 | ||
| HOMD Taxon-ID | HMT-0961 | ||
| Species Name (in use by HOMD) | Faecalibacterium prausnitzii | ||
| Organism Name (as deposited) | HMT-961 Faecalibacterium prausnitzii APC918/95b | ||
| Strain or Isolate | APC918/95b | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium; s__Faecalibacterium prausnitzii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 349 | ||
| Contigs |
|
||
| Total Sequence Length | 2,970,937 (bp) | ||
| GC Percentage | 56.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/312/465/GCA_003312465.1_ASM331246v1 | ||
| CDS | 2694 | ||
| Genes | 2819 | ||
| mRNA | 2819 | ||
| misc RNA | 43 | ||
| rRNA | 18 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.8 % | ||
| CheckM Completeness | 95.19 % | ||
| CheckM Contamination | 3.28 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM331246v1 |
| GenBank Assembly Accession | GCA_003312465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003312465.1 [NCBI] |
| BioSample | SAMN08494074 [NCBI] |
| BioProject | PRJNA432550 [NCBI] |
| Submitter | University College Cork |
| Submission Date | 2018-02-08T08:08:03.670 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 853 |
| Isolation Source | |
| Geo Location | Ireland: Cork |
