Genome Meta Information: Faecalibacterium prausnitzii ATCC 27768 (GCA_003324185.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003324185.1 | ||
| HOMD Taxon-ID | HMT-0961 | ||
| Species Name (in use by HOMD) | Faecalibacterium prausnitzii | ||
| Organism Name (as deposited) | HMT-961 Faecalibacterium prausnitzii ATCC 27768 | ||
| Strain or Isolate | ATCC 27768 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium; s__Faecalibacterium prausnitzii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 300 | ||
| Contigs |
|
||
| Total Sequence Length | 3,031,166 (bp) | ||
| GC Percentage | 56.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/324/185/GCA_003324185.1_ASM332418v1 | ||
| CDS | 2772 | ||
| Genes | 2880 | ||
| mRNA | 2880 | ||
| misc RNA | 44 | ||
| rRNA | 3 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 95.78 % | ||
| CheckM Contamination | 3.8 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM332418v1 |
| GenBank Assembly Accession | GCA_003324185.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003324185.1 [NCBI] |
| BioSample | SAMN08707943 [NCBI] |
| BioProject | PRJNA432550 [NCBI] |
| Submitter | University College Cork |
| Submission Date | 2018-03-14T06:49:08.943 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PXUP01 |
| NCBI TaxID | 853 |
| Isolation Source | |
| Geo Location | Not collected |
