Genome Meta Information: Cutibacterium acnes T20574 (GCA_003384415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003384415.1 | ||
| HOMD Taxon-ID | HMT-0530 | ||
| Species Name (in use by HOMD) | Cutibacterium acnes | ||
| Organism Name (as deposited) | HMT-530 Cutibacterium acnes T20574 | ||
| Strain or Isolate | T20574 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium acnes |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 35.7 | ||
| Contigs |
|
||
| Total Sequence Length | 2,480,333 (bp) | ||
| GC Percentage | 60.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/384/415/GCA_003384415.1_ASM338441v1 | ||
| CDS | 2312 | ||
| Genes | 2385 | ||
| mRNA | 2385 | ||
| misc RNA | 23 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.64 % | ||
| CheckM Completeness | 97.65 % | ||
| CheckM Contamination | 0.37 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM338441v1 |
| GenBank Assembly Accession | GCA_003384415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003384415.1 [NCBI] |
| BioSample | SAMN07711248 [NCBI] |
| BioProject | PRJNA393885 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2017-09-27T17:14:03.593 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PCNK01 |
| NCBI TaxID | 1747 |
| Isolation Source | Wound Right Shoulder Superficial Skin |
| Geo Location | USA: Seattle |
