Genome Meta Information: Cutibacterium modestum T33958 (GCA_003384615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003384615.1 | ||
| HOMD Taxon-ID | HMT-0193 | ||
| Species Name (in use by HOMD) | Cutibacterium modestum | ||
| Organism Name (as deposited) | HMT-193 Cutibacterium modestum T33958 | ||
| Strain or Isolate | T33958 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium modestum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 55.6 | ||
| Contigs |
|
||
| Total Sequence Length | 2,641,556 (bp) | ||
| GC Percentage | 59.99 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/384/615/GCA_003384615.1_ASM338461v1 | ||
| CDS | 2579 | ||
| Genes | 2655 | ||
| mRNA | 2655 | ||
| misc RNA | 24 | ||
| rRNA | 4 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.94 % | ||
| CheckM Completeness | 98.87 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM338461v1 |
| GenBank Assembly Accession | GCA_003384615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003384615.1 [NCBI] |
| BioSample | SAMN07711853 [NCBI] |
| BioProject | PRJNA393885 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2017-09-27T18:11:03.283 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PCZR01 |
| NCBI TaxID | 2559073 |
| Isolation Source | Wound Skin Left Shoulder non operative |
| Geo Location | USA: Seattle |
