Genome Meta Information: Klebsiella aerogenes ATCC 13048 (GCA_003417445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003417445.1 | ||
| HOMD Taxon-ID | HMT-0153 | ||
| Species Name (in use by HOMD) | Klebsiella aerogenes | ||
| Organism Name (as deposited) | HMT-153 Klebsiella aerogenes ATCC 13048 | ||
| Strain or Isolate | ATCC 13048 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella; s__Klebsiella aerogenes |
||
| Sequencing Technology | IonTorrent | ||
| Genome Coverage | 178 | ||
| Contigs |
|
||
| Total Sequence Length | 5,236,772 (bp) | ||
| GC Percentage | 54.84 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/417/445/GCA_003417445.1_ASM341744v1 | ||
| CDS | 5122 | ||
| Genes | 5325 | ||
| mRNA | 5325 | ||
| misc RNA | 123 | ||
| rRNA | 9 | ||
| tRNA | 70 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 90.11 % | ||
| CheckM Contamination | 0.54 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM341744v1 |
| GenBank Assembly Accession | GCA_003417445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003417445.1 [NCBI] |
| BioSample | SAMN09843510 [NCBI] |
| BioProject | PRJNA486324 [NCBI] |
| Submitter | Environment and Climate Change Canada |
| Submission Date | 2018-08-16T10:50:03.073 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | QVMZ01 |
| NCBI TaxID | 548 |
| Isolation Source | sputum |
| Geo Location | USA: South Carolina |
