Genome Meta Information: Cutibacterium acnes P15-014 (GCA_003426225.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003426225.1 | ||
| HOMD Taxon-ID | HMT-0530 | ||
| Species Name (in use by HOMD) | Cutibacterium acnes | ||
| Organism Name (as deposited) | HMT-530 Cutibacterium acnes P15-014 | ||
| Strain or Isolate | P15-014 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium acnes |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 58.26 | ||
| Contigs |
|
||
| Total Sequence Length | 2,546,045 (bp) | ||
| GC Percentage | 60.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/426/225/GCA_003426225.1_ASM342622v1 | ||
| CDS | 2353 | ||
| Genes | 2428 | ||
| mRNA | 2428 | ||
| misc RNA | 23 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.17 % | ||
| CheckM Completeness | 97.51 % | ||
| CheckM Contamination | 0.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM342622v1 |
| GenBank Assembly Accession | GCA_003426225.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003426225.1 [NCBI] |
| BioSample | SAMN07343882 [NCBI] |
| BioProject | PRJNA393885 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2017-07-11T18:12:04.786 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | NMRH01 |
| NCBI TaxID | 1747 |
| Isolation Source | Shoulder Tissue (Collar membrane) |
| Geo Location | USA: Seattle |
