Genome Meta Information: Anaerococcus nagyae OF01-3 (GCA_003433955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003433955.1 | ||
| HOMD Taxon-ID | HMT-792 | ||
| Species Name (in use by HOMD) | Anaerococcus nagyae | ||
| Organism Name (as deposited) | HMT-792 Anaerococcus nagyae OF01-3 | ||
| Strain or Isolate | OF01-3 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus; s__Anaerococcus nagyae |
||
| Sequencing Technology | Illumina Hiseq | ||
| Genome Coverage | 100.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,825,047 (bp) | ||
| GC Percentage | 30.67 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/433/955/GCA_003433955.1_ASM343395v1 | ||
| CDS | 1696 | ||
| Genes | 1779 | ||
| mRNA | 1779 | ||
| misc RNA | 30 | ||
| rRNA | 5 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.12 % | ||
| CheckM Completeness | 98.78 % | ||
| CheckM Contamination | 0.61 % | ||
| CheckM2 Completeness | 99.46 % | ||
| CheckM2 Contamination | 0.91 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM343395v1 |
| GenBank Assembly Accession | GCA_003433955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003433955.1 [NCBI] |
| BioSample | SAMN09736673 [NCBI] |
| BioProject | PRJNA482748 [NCBI] |
| Submitter | BGI |
| Submission Date | 2018-07-30T02:31:12.833 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QVEU01 |
| NCBI TaxID | 1755241 |
| Isolation Source | feces |
| Geo Location | China: Shenzhen |
