Genome Meta Information: Streptococcus parasanguinis AM27-45 (GCA_003469565.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003469565.1 | ||
| HOMD Taxon-ID | HMT-0411 | ||
| Species Name (in use by HOMD) | Streptococcus parasanguinis | ||
| Organism Name (as deposited) | HMT-411 Streptococcus parasanguinis AM27-45 | ||
| Strain or Isolate | AM27-45 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus parasanguinis_C |
||
| Sequencing Technology | IonProton | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,059,623 (bp) | ||
| GC Percentage | 41.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/469/565/GCA_003469565.1_ASM346956v1 | ||
| CDS | 2128 | ||
| Genes | 2218 | ||
| mRNA | 2218 | ||
| misc RNA | 38 | ||
| rRNA | 8 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.21 % | ||
| CheckM Completeness | 82.67 % | ||
| CheckM Contamination | 1.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM346956v1 |
| GenBank Assembly Accession | GCA_003469565.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003469565.1 [NCBI] |
| BioSample | SAMN09736362 [NCBI] |
| BioProject | PRJNA482748 [NCBI] |
| Submitter | BGI |
| Submission Date | 2018-07-30T02:31:07.997 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | QSKM01 |
| NCBI TaxID | 1318 |
| Isolation Source | feces |
| Geo Location | China: Shenzhen |
