Genome Meta Information: Staphylococcus haemolyticus VB19458 (GCA_003596365.3)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003596365.3 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus VB19458 | ||
| Strain or Isolate | VB19458 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | IonTorrent; Oxford Nanopore MiniION | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 2,699,210 (bp) | ||
| GC Percentage | 32.77 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/596/365/GCA_003596365.3_ASM359636v3 | ||
| CDS | 2724 | ||
| Genes | 2907 | ||
| mRNA | 2907 | ||
| misc RNA | 100 | ||
| rRNA | 19 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.35 % | ||
| CheckM Completeness | 99.23 % | ||
| CheckM Contamination | 0.19 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM359636v3 |
| GenBank Assembly Accession | GCA_003596365.3 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003596365.3 [NCBI] |
| BioSample | SAMN10031556 [NCBI] |
| BioProject | PRJNA490266 [NCBI] |
| Submitter | Christian Medical College |
| Submission Date | 2018-09-11T06:48:05.126 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1283 |
| Isolation Source | blood |
| Geo Location | India |
