Genome Meta Information: Enterococcus casseliflavus EC-369 (GCA_003641225.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003641225.1 | ||
| HOMD Taxon-ID | HMT-0801 | ||
| Species Name (in use by HOMD) | Enterococcus casseliflavus | ||
| Organism Name (as deposited) | HMT-801 Enterococcus casseliflavus EC-369 | ||
| Strain or Isolate | EC-369 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_D; s__Enterococcus_D casseliflavus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 50 | ||
| Contigs |
|
||
| Total Sequence Length | 3,668,336 (bp) | ||
| GC Percentage | 42.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/641/225/GCA_003641225.1_ASM364122v1 | ||
| CDS | 3443 | ||
| Genes | 3583 | ||
| mRNA | 3583 | ||
| misc RNA | 61 | ||
| rRNA | 15 | ||
| tRNA | 63 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.51 % | ||
| CheckM Completeness | 98.46 % | ||
| CheckM Contamination | 3.43 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM364122v1 |
| GenBank Assembly Accession | GCA_003641225.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003641225.1 [NCBI] |
| BioSample | SAMN10174870 [NCBI] |
| BioProject | PRJNA494612 [NCBI] |
| Submitter | wenzhou medical university |
| Submission Date | 2018-10-03T23:15:07.410 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 37734 |
| Isolation Source | |
| Geo Location | China: Zhejiang |
